Index

_

_abc_impl (mangadap.util.lineprofiles.GaussianLineProfile attribute) _add_channels_to_header() (mangadap.survey.dapall.DAPall method) _add_method_header() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _add_par_slice() (mangadap.proc.rukia.Rukia method) _add_reddening_header() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) _all_data_exists() (mangadap.survey.drpcomplete.DRPComplete method) _apply() (mangadap.util.filter.BoxcarFilter method) _apply_reddening() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) _artifact_mask() (mangadap.util.pixelmask.SpectralPixelMask method) _assess_and_save_fit() (mangadap.proc.elric.Elric method) _assign_image_arrays() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _assign_input_kinematics() (mangadap.proc.emissionlinemodel.EmissionLineModel method) _assign_par() (mangadap.proc.elric.LineProfileFit method) (mangadap.util.filter.BoxcarFilter method) _assign_redshifts() (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spectralindices.SpectralIndices method) _assign_spectral_arrays() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _binned_data_table() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) _binning_metrics() (mangadap.survey.dapall.DAPall static method) _build_binning_mask() (mangadap.dapfits.construct_maps_file method) _build_post_queue() (mangadap.survey.rundap.rundap method) _build_proc_queue() (mangadap.survey.rundap.rundap method) _build_raw_hdu() (mangadap.proc.templatelibrary.TemplateLibrary method) _calculate_cartesian() (mangadap.util.geometry.SemiMajorAxisCoo method) _calculate_covariance_matrix() (mangadap.proc.elric.LineProfileFit method) _calculate_polar() (mangadap.util.geometry.SemiMajorAxisCoo method) _check() (mangadap.par.artifactdb.ArtifactPar method) (mangadap.par.emissionlinedb.EmissionLinePar method) (mangadap.proc.bandpassfilter.BandPassFilterPar method) _check_covariance_shape() (mangadap.proc.spectralstack.SpectralStack static method) _check_covariance_type() (mangadap.proc.spectralstack.SpectralStack static method) _check_eml_kin_argument() (mangadap.util.pixelmask.SpectralPixelMask method) _check_input_sres() (mangadap.proc.spectralstack.SpectralStack static method) _check_mode() (mangadap.proc.ppxffit.PPXFFit method) _check_par() (mangadap.util.filter.BoxcarFilter method) _check_remapping_coordinates() (mangadap.proc.sasuke.Sasuke method) _check_shape() (mangadap.util.resolution.VariableGaussianKernel method) _check_snr() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) _chi() (mangadap.proc.elric.LineProfileFit method) _combine_stellar_templates() (in module mangadap.contrib.xjmc) _compile_database() (mangadap.proc.spectralindices.SpectralIndices method) _config_comment() (mangadap.par.parset.ParSet static method) _confirm_access() (mangadap.survey.drpcomplete.DRPComplete method) _consolidate_donotuse() (mangadap.dapfits.construct_maps_file method) _construct_2d_hdu() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _construct_maps_file_list() (mangadap.survey.dapall.DAPall method) _convert_pd2vd() (mangadap.util.resolution.SpectralResolution method) _convert_vd2pd() (mangadap.util.resolution.SpectralResolution method) _coordinate_grid() (mangadap.util.sampling.Resample static method) _correct_subeml_par() (mangadap.proc.elric.Elric static method) _covar_in_mean() (mangadap.proc.spectralstack.SpectralStack method) _create_a() (mangadap.util.resolution.VariableGaussianKernel method) _create_queue() (mangadap.survey.rundap.rundap method) _cube_dimensions() (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) _data_string() (mangadap.par.parset.ParSet static method) _data_table_string() (mangadap.par.parset.ParSet static method) _defined() (mangadap.util.geometry.SemiMajorAxisCoo method) _deredden_vec() (mangadap.util.extinction.GalacticExtinction method) _dtype (mangadap.util.datatable.DataTable attribute) _emission_line_db_info() (mangadap.survey.dapall.DAPall static method) _emission_line_mask() (mangadap.util.pixelmask.SpectralPixelMask method) _emission_line_metrics() (mangadap.survey.dapall.DAPall method) _emission_line_model_mask_to_map_mask() (mangadap.dapfits.construct_maps_file method) _emission_line_moment_db_info() (mangadap.survey.dapall.DAPall static method) _emission_line_moment_mask_to_map_mask() (mangadap.dapfits.construct_maps_file method) _empty_mask() (mangadap.util.pixelmask.PixelMask method) _eval_ignore() (in module mangadap.par.util) _fill_ppxf_par() (mangadap.proc.ppxffit.PPXFFit method) _fill_sequence() (mangadap.util.bitmask.BitMask static method) _finalize_cube_mask() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _finalize_GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method) _find_completed_reductions() (mangadap.survey.drpcomplete.DRPComplete method) _find_modes() (mangadap.survey.drpcomplete.DRPComplete method) _find_tied_index() (mangadap.proc.elric.Elric static method) _fit_all_spectra() (mangadap.proc.ppxffit.PPXFFit method) _fit_dispersion_correction() (mangadap.proc.ppxffit.PPXFFit method) _fit_global_spectrum() (mangadap.proc.ppxffit.PPXFFit method) _fit_iteration() (in module mangadap.contrib.xjmc) _fit_masks() (mangadap.proc.elric.Elric static method) _fix_inputs() (mangadap.util.lineprofiles.GaussianLineProfile method) _flag_good_spectra() (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spectralindices.SpectralIndices method) _formal_covariance_matrix() (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) _get_completed_observations() (mangadap.survey.dapall.DAPall method) _get_data_mask() (mangadap.dapfits.construct_cube_file method) _get_emission_line_bands() (mangadap.util.pixelmask.SpectralPixelMask method) _get_emission_line_model_mask() (mangadap.dapfits.construct_cube_file method) _get_input_mask() (mangadap.proc.spectralstack.SpectralStack static method) _get_kpc_per_arcsec() (mangadap.dapfits.construct_maps_file static method) _get_line_fit_metrics() (mangadap.proc.emissionlinemodel.EmissionLineModel method) _get_losvd_kernels() (mangadap.proc.ppxffit.PPXFFit method) _get_missing_bins() (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra static method) (mangadap.proc.spectralindices.SpectralIndices method) _get_missing_models() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _get_nchannels() (mangadap.proc.templatelibrary.TemplateLibrary method) _get_pixelscale() (mangadap.datacube.datacube.DataCube method) _get_stack_mean() (mangadap.proc.spectralstack.SpectralStack method) _get_stellar_continuum_mask() (mangadap.dapfits.construct_cube_file method) _get_val_and_vander() (mangadap.util.trace.TraceSet method) _get_wavelength_vector() (mangadap.datacube.datacube.DataCube method) _good_templates() (in module mangadap.contrib.xjmc) _grab_true_index() (mangadap.util.covariance.Covariance method) _halpha_kinematics_metrics() (mangadap.survey.dapall.DAPall method) _impose_upper_triangle() (mangadap.util.covariance.Covariance method) _include_no_model_mask() (mangadap.dapfits.construct_cube_file method) _index_database_dtype() (mangadap.proc.spectralindices.SpectralIndices method) _init_data() (mangadap.proc.rukia.Rukia static method) _init_objs() (mangadap.util.bitmask.BitMask method)

_init_par() (mangadap.proc.rukia.Rukia method) _init_rectification_parameters() (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) _init_string_lengths() (mangadap.survey.dapall.DAPall method) _initialize_primary_header() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.reductionassessments.ReductionAssessment method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) _interpolate() (mangadap.util.filter.BoxcarFilter method) _is_dynamic (mangadap.util.lineprofiles.GaussianLineProfile attribute) _is_near_bound() (mangadap.proc.elric.Elric static method) _is_near_bounds() (mangadap.proc.ppxffit.PPXFFit method) (mangadap.proc.sasuke.Sasuke method) _join_maps() (mangadap.dapfits.construct_maps_file static method) _line_velocity_offset() (mangadap.proc.elric.Elric static method) _mask_coordinate_ranges() (mangadap.util.pixelmask.PixelMask method) _mask_data_type() (mangadap.util.fitsutil.DAPFitsUtil static method) _match_drpall() (mangadap.survey.drpcomplete.DRPComplete method) _match_map_arrays_integer_pixel_shift() (in module mangadap.util.mapping) _match_map_arrays_sub_pixel_shift() (in module mangadap.util.mapping) _minimum_sampling() (mangadap.proc.templatelibrary.TemplateLibrary method) _mode_includes_rejection() (mangadap.proc.ppxffit.PPXFFit method) _mode_uses_all_templates() (mangadap.proc.ppxffit.PPXFFit method) _mode_uses_global_spectrum() (mangadap.proc.ppxffit.PPXFFit method) _mode_uses_global_template() (mangadap.proc.ppxffit.PPXFFit method) _mode_uses_nonzero_templates() (mangadap.proc.ppxffit.PPXFFit method) _modify_spectral_resolution() (mangadap.proc.templatelibrary.TemplateLibrary method) _mom1_integrand() (mangadap.util.lineprofiles.NCompLineProfile method) _mom2_integrand() (mangadap.util.lineprofiles.NCompLineProfile method) _mul_par_slice() (mangadap.proc.rukia.Rukia method) _nominal_dispersion_correction() (mangadap.proc.ppxffit.PPXFFit method) _normalized_coordinates() (mangadap.util.trace.TraceSet method) _output_string() (mangadap.par.parset.ParSet method) _parameters_ (mangadap.util.lineprofiles.GaussianLineProfile attribute) _parse_emission_line_database() (mangadap.proc.emissionlinetemplates.EmissionLineTemplates method) _parse_emission_line_models() (mangadap.proc.elric.Elric method) _parse_rectification_parameters() (mangadap.spectra.manga.MaNGARSS static method) _parse_yanny() (mangadap.par.absorptionindexdb.AbsorptionIndexDB method) (mangadap.par.artifactdb.ArtifactDB method) (mangadap.par.bandheadindexdb.BandheadIndexDB method) (mangadap.par.emissionlinedb.EmissionLineDB method) (mangadap.par.emissionmomentsdb.EmissionMomentsDB method) (mangadap.par.spectralfeaturedb.SpectralFeatureDB method) _per_fitting_window_dtype() (mangadap.proc.elric.Elric static method) _ppxf_component_setup() (in module mangadap.contrib.xjmc) _prep_flags() (mangadap.util.bitmask.BitMask method) _process_library() (mangadap.proc.templatelibrary.TemplateLibrary method) _quick_sample() (mangadap.proc.elric.LineProfileFit method) (mangadap.util.lineprofiles.NCompLineProfile method) _r_start_step() (mangadap.proc.spatialbinning.RadialBinning method) _radial_coverage_metric() (mangadap.survey.dapall.DAPall static method) _read() (mangadap.survey.dapall.DAPall method) (mangadap.survey.drpcomplete.DRPComplete method) _read_file_list() (mangadap.survey.rundap.rundap method) _read_fix_data() (mangadap.survey.drpcomplete.DRPComplete method) _read_photometry_fix() (mangadap.survey.drpcomplete.DRPComplete method) _read_raw() (mangadap.proc.templatelibrary.TemplateLibrary method) _read_redshift_fix() (mangadap.survey.drpcomplete.DRPComplete method) _rebin_masked() (mangadap.proc.templatelibrary.TemplateLibrary method) _recalibrate_ivar_figure() (mangadap.proc.spectralstack.SpectralStack method) _redden_vec() (mangadap.util.extinction.GalacticExtinction method) _reduce_indices() (mangadap.util.filter.BoxcarFilter method) _reinit_rectification_parameters() (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) _reorder_solution() (in module mangadap.contrib.xjmc) _resample_linear() (mangadap.util.sampling.Resample method) _resample_step() (mangadap.util.sampling.Resample method) _resample_step_matrix() (mangadap.util.sampling.Resample method) _reset_components() (in module mangadap.contrib.xjmc) _reset_hdu() (mangadap.proc.templatelibrary.TemplateLibrary method) _reset_kinematic_constraints() (in module mangadap.contrib.xjmc) _reset_range() (mangadap.proc.rukia.Rukia method) _reset_to_fill_value() (mangadap.proc.sasuke.Sasuke method) _resid() (mangadap.proc.elric.LineProfileFit method) _resolution_matched_templates() (mangadap.proc.spectralindices.SpectralIndices method) _rst_class_name() (mangadap.par.parset.ParSet static method) _run_fit_iteration() (mangadap.proc.ppxffit.PPXFFit method) _save_results() (mangadap.proc.ppxffit.PPXFFit method) (mangadap.proc.sasuke.Sasuke method) _selected_drpfile_rows() (mangadap.survey.rundap.rundap method) _set_dtypes() (mangadap.par.parset.ParDatabase static method) _set_no_model() (mangadap.dapfits.construct_cube_file method) _set_par() (mangadap.proc.rukia.Rukia method) _set_profile_ties() (mangadap.proc.elric.Elric static method) _set_rebin_transfer_matrix() (mangadap.proc.spectralstack.SpectralStack method) _set_shape() (mangadap.util.covariance.Covariance method) (mangadap.util.pixelmask.PixelMask method) _set_to_using_optimal_templates() (in module mangadap.contrib.xjmc) _setA() (mangadap.util.geometry.SemiMajorAxisCoo method) _setB() (mangadap.util.geometry.SemiMajorAxisCoo method) _setC() (mangadap.util.geometry.SemiMajorAxisCoo method) _setD() (mangadap.util.geometry.SemiMajorAxisCoo method) _sigma_par_slice() (mangadap.proc.rukia.Rukia method) _single_fit() (mangadap.util.vander.Vander1D method) _spectral_index_db_info() (mangadap.survey.dapall.DAPall static method) _spectral_index_mask_to_map_mask() (mangadap.dapfits.construct_maps_file method) _spectral_index_metrics() (mangadap.survey.dapall.DAPall method) _srd_snr_metric() (mangadap.survey.dapall.DAPall method) _stack_with_covariance() (mangadap.proc.spectralstack.SpectralStack method) _stack_without_covariance() (mangadap.proc.spectralstack.SpectralStack method) _stellar_continuum_mask_to_map_mask() (mangadap.dapfits.construct_maps_file method) _stellar_kinematics_metrics() (mangadap.survey.dapall.DAPall method) _table_dtype() (mangadap.survey.dapall.DAPall method) _types_list() (mangadap.par.parset.ParSet method) _unbinned_data_table() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) _validate() (mangadap.config.analysisplan.AnalysisPlan method) (mangadap.par.emissionlinedb.EmissionLineDB method) (mangadap.par.spectralfeaturedb.SpectralFeatureDB method) (mangadap.proc.emissionlinemodel.EmissionLineModelDef method) (mangadap.proc.emissionlinemoments.EmissionLineMomentsDef method) (mangadap.proc.reductionassessments.ReductionAssessmentDef method) (mangadap.proc.sasuke.SasukePar method) (mangadap.proc.spectralindices.SpectralIndicesDef method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModelDef method) (mangadap.proc.templatelibrary.TemplateLibraryDef method) _validate_dispersions() (mangadap.proc.sasuke.Sasuke method) _validate_kinematics() (mangadap.proc.ppxffit.PPXFFit method) _validate_templates_components() (in module mangadap.contrib.xjmc) _velocity_vectors() (mangadap.proc.elric.Elric static method) _wavelength_range() (mangadap.proc.templatelibrary.TemplateLibrary method) _waverange_mask() (mangadap.util.pixelmask.SpectralPixelMask method) _wrap_print() (mangadap.par.parset.ParSet method)

A

A (mangadap.util.geometry.SemiMajorAxisCoo attribute) A_ineq (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) above_snr_limit() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) AbsorptionIndexDB (class in mangadap.par.absorptionindexdb) AbsorptionLineIndices (class in mangadap.proc.spectralindices) add() (mangadap.par.parset.KeywordParSet method) (mangadap.par.parset.ParSet method) add_channel_names() (mangadap.util.fitsutil.DAPFitsUtil static method) add_par() (mangadap.proc.rukia.Rukia method) add_snr_metrics_to_header() (in module mangadap.dapfits) adjust_spectral_resolution() (mangadap.proc.spectralindices.SpectralIndices static method) adjusted_resolution() (mangadap.util.resolution.SpectralResolution method) all_except_emission_flags() (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) all_required() (mangadap.util.parser.DefaultConfig method) all_spectrum_flags() (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) all_subclasses() (in module mangadap.util.pkg) allowed_functions() (mangadap.util.trace.TraceSet static method) Alu (mangadap.util.geometry.SemiMajorAxisCoo attribute) analysis_path (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) (mangadap.survey.rundap.rundap attribute) AnalysisPlan (class in mangadap.config.analysisplan) angstroms_per_pixel() (in module mangadap.util.sampling)

Apiv (mangadap.util.geometry.SemiMajorAxisCoo attribute) append() (mangadap.par.parset.ParDatabase method) (mangadap.proc.elric.ElricFittingWindow method) (mangadap.util.datatable.DataTable method) apply() (mangadap.util.extinction.GalacticExtinction method) apply_dispersion_corrections() (mangadap.proc.spectralindices.SpectralIndices static method) apply_new_variance() (mangadap.util.covariance.Covariance method) approx_correl (mangadap.datacube.datacube.DataCube attribute) approximate_correlation_matrix() (mangadap.datacube.datacube.DataCube method) (mangadap.datacube.manga.MaNGADataCube method) approximate_covariance_cube() (mangadap.datacube.datacube.DataCube method) (mangadap.datacube.manga.MaNGADataCube method) approximate_covariance_matrix() (mangadap.datacube.datacube.DataCube method) (mangadap.datacube.manga.MaNGADataCube method) area (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) arginp_to_list() (in module mangadap.util.parser) artdb (mangadap.util.pixelmask.SpectralPixelMask attribute) ArtifactDB (class in mangadap.par.artifactdb) ArtifactPar (class in mangadap.par.artifactdb) assign_err() (mangadap.util.lineprofiles.NCompLineProfile method) assign_par() (mangadap.util.lineprofiles.NCompLineProfile method) available_databases() (mangadap.par.spectralfeaturedb.SpectralFeatureDB class method) AvgLMCExtinctionCoefficients (class in mangadap.util.extinction)

B

B (mangadap.util.geometry.SemiMajorAxisCoo attribute) b_ineq (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) BandheadIndexDB (class in mangadap.par.bandheadindexdb) BandheadIndices (class in mangadap.proc.spectralindices) BandPassFilterPar (class in mangadap.proc.bandpassfilter) base (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) base_order (mangadap.proc.elric.LineProfileFit attribute) bin_area() (mangadap.proc.spatialbinning.RadialBinning method) bin_index() (mangadap.proc.spatialbinning.GlobalBinning static method) (mangadap.proc.spatialbinning.RadialBinning method) (mangadap.proc.spatialbinning.SpatialBinning static method) (mangadap.proc.spatialbinning.SquareBinning method) (mangadap.proc.spatialbinning.VoronoiBinning method) bin_spectra() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) bin_to_spaxel_covariance() (mangadap.util.covariance.Covariance method) binned_data_cube() (mangadap.dapfits.construct_cube_file method) binned_on_sky_area() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) binned_spectra_maps() (mangadap.dapfits.construct_maps_file method) BitMask (class in mangadap.util.bitmask)

bitmask (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.ppxffit.PPXFFit attribute) (mangadap.proc.rukia.Rukia attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) bits (mangadap.util.bitmask.BitMask attribute) bits() (mangadap.util.pixelmask.SpectralPixelMask method) blue_center (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) blue_continuum (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) blue_continuum_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) blue_empty (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) blue_incomplete (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) boolean() (mangadap.util.pixelmask.SpectralPixelMask method) borders_to_centers() (in module mangadap.util.sampling) bounds (mangadap.proc.elric.LineProfileFit attribute) boxcar_smooth_vector() (in module mangadap.util.filter) BoxcarFilter (class in mangadap.util.filter) build_covariance_data() (mangadap.proc.spectralstack.SpectralStack static method) build_cube_header() (mangadap.util.fitsutil.DAPFitsUtil static method) build_map_header() (mangadap.util.fitsutil.DAPFitsUtil static method) build_smoothing_mask() (in module mangadap.util.filter) build_templates() (mangadap.proc.emissionlinetemplates.EmissionLineTemplates method)

C

C (mangadap.util.geometry.SemiMajorAxisCoo attribute) c (mangadap.util.resolution.SpectralResolution attribute) calculate_dispersion_corrections() (mangadap.proc.spectralindices.SpectralIndices static method) calculate_noise() (in module mangadap.contrib.xjmc) can_analyze (mangadap.datacube.datacube.DataCube property) (mangadap.survey.rundap.rundap attribute) can_analyze() (mangadap.survey.drpcomplete.DRPComplete method) can_call (mangadap.par.parset.ParSet attribute) can_compute_covariance (mangadap.datacube.datacube.DataCube property) cartesian() (mangadap.util.geometry.SemiMajorAxisCoo method) cartesian_invert() (mangadap.util.geometry.SemiMajorAxisCoo method) centers_to_borders() (in module mangadap.util.sampling) central_wavelength() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) cfg_comment (mangadap.par.parset.ParSet attribute) cfg_root (mangadap.config.manga.MaNGAConfig property) (mangadap.dapfits.DAPCubeBitMask attribute) (mangadap.dapfits.DAPMapsBitMask attribute) (mangadap.dapfits.DAPQualityBitMask attribute) (mangadap.proc.emissionlinemodel.EmissionLineModelBitMask attribute) (mangadap.proc.emissionlinemoments.EmissionLineMomentsBitMask attribute) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectraBitMask attribute) (mangadap.proc.spectralindices.SpectralIndicesBitMask attribute) (mangadap.proc.stellarcontinuummodel.StellarContinuumModelBitMask attribute) (mangadap.proc.templatelibrary.TemplateLibraryBitMask attribute) (mangadap.util.dapbitmask.DAPBitMask attribute) cfg_section (mangadap.par.parset.ParSet attribute) channel_dictionary() (in module mangadap.util.fileio) channel_names() (mangadap.par.absorptionindexdb.AbsorptionIndexDB method) (mangadap.par.bandheadindexdb.BandheadIndexDB method) (mangadap.par.emissionlinedb.EmissionLineDB method) (mangadap.par.emissionmomentsdb.EmissionMomentsDB method) (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) channel_units() (in module mangadap.util.fileio) check_and_prep_input() (mangadap.proc.spectralfitting.EmissionLineFit static method) (mangadap.proc.spectralindices.SpectralIndices static method) check_cross_pixel() (in module mangadap.contrib.LambdaR_2D_forMaNGA) check_emission_line_database() (mangadap.proc.spectralfitting.EmissionLineFit static method) check_fgoodpix() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) check_input_kinematics() (mangadap.proc.ppxffit.PPXFFit static method) check_mode() (mangadap.config.manga.MaNGAConfig static method) check_objects() (mangadap.proc.ppxffit.PPXFFit static method) check_pixel_scale() (mangadap.proc.ppxffit.PPXFFit static method) check_resolution_match() (mangadap.proc.ppxffit.PPXFFit static method) check_template_usage_flags() (mangadap.proc.ppxffit.PPXFFit static method) check_templates() (mangadap.proc.ppxffit.PPXFFit static method) Circle_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA) clean_cube_header() (mangadap.util.fitsutil.DAPFitsUtil static method) clean_dap_primary_header() (mangadap.util.fitsutil.DAPFitsUtil static method) clean_map_header() (mangadap.util.fitsutil.DAPFitsUtil static method) Clu (mangadap.util.geometry.SemiMajorAxisCoo attribute) combinatorics (mangadap.survey.rundap.rundap attribute) combine_binid_extensions() (in module mangadap.dapfits) common_path() (mangadap.config.analysisplan.AnalysisPlan method) (mangadap.config.manga.MaNGAAnalysisPlan method) comp (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) comp_moments (mangadap.proc.sasuke.Sasuke attribute) comp_start_kin (mangadap.proc.sasuke.Sasuke attribute) compile_model_flux() (mangadap.proc.ppxffit.PPXFFit static method) compress_file() (in module mangadap.util.fileio) compute() (mangadap.proc.reductionassessments.ReductionAssessment method) (mangadap.util.extinction.GalacticExtinction method)

config_lines() (mangadap.par.parset.ParSet static method) confirm_dap_types() (in module mangadap.dapfits) consolidate() (mangadap.util.bitmask.BitMask method) construct() (mangadap.proc.ppxffit.PPXFModel method) construct_3d_hdu() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) construct_continuum_models() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.sasuke.Sasuke static method) construct_cube_file (class in mangadap.dapfits) construct_maps_file (class in mangadap.dapfits) construct_models() (mangadap.proc.ppxffit.PPXFFit static method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) continuum_b (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) continuum_m (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) continuum_subtracted_moments() (mangadap.proc.emissionlinemoments.EmissionLineMoments static method) convert_velocity() (mangadap.proc.ppxffit.PPXFFit static method) convolution_variable_sigma() (in module mangadap.util.resolution) convolve() (mangadap.util.resolution.VariableGaussianKernel method) coo() (mangadap.util.geometry.SemiMajorAxisCoo method) coordinate_data() (mangadap.util.covariance.Covariance method) copy() (mangadap.config.manga.MaNGAConfig method) (mangadap.util.covariance.Covariance method) copy_to_array() (mangadap.datacube.datacube.DataCube method) (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) (mangadap.util.fitsutil.DAPFitsUtil static method) copy_to_masked_array() (mangadap.datacube.datacube.DataCube method) (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) (mangadap.util.fitsutil.DAPFitsUtil static method) correl_rlim (mangadap.datacube.datacube.DataCube attribute) correlation (mangadap.proc.reductionassessments.ReductionAssessment attribute) cosmo (mangadap.survey.dapall.DAPall attribute) count_indices() (mangadap.proc.spectralindices.SpectralIndices static method) cov (mangadap.proc.elric.LineProfileFit attribute) (mangadap.util.covariance.Covariance attribute) covar (mangadap.datacube.datacube.DataCube attribute) (mangadap.util.sampling.Resample attribute) covar_channel (mangadap.proc.reductionassessments.ReductionAssessment attribute) covar_wave (mangadap.proc.reductionassessments.ReductionAssessment attribute) Covariance (class in mangadap.util.covariance) covariance_cube() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) covariance_matrix() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) covariance_mode_options() (mangadap.proc.spectralstack.SpectralStack static method) Cpiv (mangadap.util.geometry.SemiMajorAxisCoo attribute) create (mangadap.survey.rundap.rundap attribute) create_symlink() (in module mangadap.util.fileio) cube (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) cube_pixelscale() (mangadap.config.manga.MaNGAConfig static method) cube_recenter() (mangadap.config.manga.MaNGAConfig static method) cube_width_buffer() (mangadap.config.manga.MaNGAConfig static method)

D

D (mangadap.util.geometry.SemiMajorAxisCoo attribute) dap_analysis_path() (in module mangadap.config.manga) dap_config() (in module mangadap.config.manga) dap_config_root() (in module mangadap.config.defaults) dap_data_root() (in module mangadap.config.defaults) dap_file_root() (mangadap.config.analysisplan.AnalysisPlan method) dap_source_dir() (in module mangadap.config.defaults) dap_version() (in module mangadap.config.manga) DAPall (class in mangadap.survey.dapall) dapall_file() (in module mangadap.config.manga) DAPBitMask (class in mangadap.util.dapbitmask) DAPConstants (class in mangadap.util.constants) DAPCubeBitMask (class in mangadap.dapfits) DAPFitsUtil (class in mangadap.util.fitsutil) DAPMapsBitMask (class in mangadap.dapfits) dapproc (mangadap.survey.rundap.rundap attribute) DAPQualityBitMask (class in mangadap.dapfits) daptypes (mangadap.survey.rundap.rundap attribute) dapver (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) (mangadap.survey.rundap.rundap attribute) data (mangadap.par.parset.ParSet attribute) (mangadap.util.datatable.DataTable attribute) DataCube (class in mangadap.datacube.datacube) DataTable (class in mangadap.util.datatable) deconstruct_bins_options() (mangadap.proc.sasuke.Sasuke static method) default (mangadap.par.parset.ParSet attribute) default() (mangadap.config.analysisplan.AnalysisPlan class method) default_calzetti_rv() (in module mangadap.util.extinction) default_ccm_rv() (in module mangadap.util.extinction) default_data_dir (mangadap.par.absorptionindexdb.AbsorptionIndexDB attribute) (mangadap.par.artifactdb.ArtifactDB attribute) (mangadap.par.bandheadindexdb.BandheadIndexDB attribute) (mangadap.par.emissionlinedb.EmissionLineDB attribute) (mangadap.par.emissionmomentsdb.EmissionMomentsDB attribute) (mangadap.par.spectralfeaturedb.SpectralFeatureDB attribute) default_fm_rv() (in module mangadap.util.extinction) default_path() (mangadap.par.spectralfeaturedb.SpectralFeatureDB class method) default_paths() (in module mangadap.dapfits) (mangadap.proc.emissionlinemodel.EmissionLineModel static method) (mangadap.proc.emissionlinemoments.EmissionLineMoments static method) (mangadap.proc.reductionassessments.ReductionAssessment static method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra static method) (mangadap.proc.spectralindices.SpectralIndices static method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel static method) (mangadap.proc.templatelibrary.TemplateLibrary static method)

DefaultConfig (class in mangadap.util.parser) degree (mangadap.proc.sasuke.Sasuke attribute) Derive_LR_VS_Profiles() (in module mangadap.contrib.LambdaR_2D_forMaNGA) derive_unbinned_field() (in module mangadap.contrib.LambdaR_2D_forMaNGA) descr (mangadap.par.parset.ParSet attribute) (mangadap.util.bitmask.BitMask attribute) (mangadap.util.datatable.DataTable attribute) dim (mangadap.util.covariance.Covariance attribute) directory_path (mangadap.proc.templatelibrary.TemplateLibrary attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) dist2() (in module mangadap.contrib.LambdaR_2D_forMaNGA) divbyzero (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) do_not_fit_flags() (mangadap.config.manga.MaNGAConfig static method) (mangadap.datacube.datacube.DataCube static method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra static method) do_not_stack_flags() (mangadap.config.manga.MaNGAConfig static method) (mangadap.datacube.datacube.DataCube static method) do_not_use_flags() (mangadap.config.manga.MaNGAConfig static method) (mangadap.datacube.datacube.DataCube static method) dof (mangadap.proc.sasuke.Sasuke attribute) downselect_bins() (mangadap.util.fitsutil.DAPFitsUtil static method) drp_directory_path() (in module mangadap.config.manga) drp_finding_chart_path() (in module mangadap.config.manga) drp_redux_path() (in module mangadap.config.manga) drp_version() (in module mangadap.config.manga) drpall (mangadap.survey.drpcomplete.DRPComplete attribute) drpall_file (mangadap.survey.dapall.DAPall attribute) drpall_file() (in module mangadap.config.manga) drpc (mangadap.survey.rundap.rundap attribute) DRPComplete (class in mangadap.survey.drpcomplete) DRPFitsBitMask (class in mangadap.util.drpbitmask) DRPQuality3DBitMask (class in mangadap.util.drpbitmask) drpver (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) dtype (mangadap.par.parset.ParSet attribute) (mangadap.util.datatable.DataTable property) dummy (mangadap.par.absorptionindexdb.AbsorptionIndexDB attribute) (mangadap.par.bandheadindexdb.BandheadIndexDB attribute) (mangadap.par.emissionmomentsdb.EmissionMomentsDB attribute) dv (mangadap.util.resolution.SpectralResolution attribute) dw (mangadap.util.resolution.SpectralResolution attribute) dx (mangadap.util.lineprofiles.FFTGaussianLSF attribute) (mangadap.util.lineprofiles.IntegratedGaussianLSF attribute)

E

e (mangadap.util.sampling.Resample attribute) element_shapes (mangadap.util.datatable.DataTable attribute) ell (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.util.geometry.SemiMajorAxisCoo attribute) Elric (class in mangadap.proc.elric) ElricFittingWindow (class in mangadap.proc.elric) ElricPar (class in mangadap.proc.elric) emission_line_equivalent_width() (in module mangadap.proc.bandpassfilter) emission_line_model_maps() (mangadap.dapfits.construct_maps_file method) emission_line_moment_maps() (mangadap.dapfits.construct_maps_file method) EmissionLineDB (class in mangadap.par.emissionlinedb) EmissionLineDefinitionTable (class in mangadap.par.emissionlinedb) EmissionLineFit (class in mangadap.proc.spectralfitting) EmissionLineFitDataTable (class in mangadap.proc.spectralfitting) EmissionLineModel (class in mangadap.proc.emissionlinemodel) EmissionLineModelBitMask (class in mangadap.proc.emissionlinemodel) EmissionLineModelDef (class in mangadap.proc.emissionlinemodel) EmissionLineMoments (class in mangadap.proc.emissionlinemoments) EmissionLineMomentsBitMask (class in mangadap.proc.emissionlinemoments)

EmissionLineMomentsDataTable (class in mangadap.proc.emissionlinemoments) EmissionLineMomentsDef (class in mangadap.proc.emissionlinemoments) EmissionLinePar (class in mangadap.par.emissionlinedb) EmissionLineTemplates (class in mangadap.proc.emissionlinetemplates) EmissionMomentsDB (class in mangadap.par.emissionmomentsdb) EmissionMomentsDefinitionTable (class in mangadap.par.emissionmomentsdb) eml_compi (mangadap.proc.sasuke.Sasuke attribute) eml_sigma_inst (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) eml_tpli (mangadap.proc.sasuke.Sasuke attribute) emldb (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.proc.sasuke.Sasuke attribute) (mangadap.util.pixelmask.SpectralPixelMask attribute) emline_fitter_with_ppxf() (in module mangadap.contrib.xjmc) empty_fit() (mangadap.proc.ppxffit.PPXFFitResult method) empty_hdus() (mangadap.util.fitsutil.DAPFitsUtil static method) entry_index() (mangadap.survey.drpcomplete.DRPComplete method) err (mangadap.proc.elric.LineProfileFit attribute) etpl_line_sigma_options() (mangadap.proc.sasuke.Sasuke static method) evaluate() (mangadap.util.lineprofiles.GaussianLineProfile static method)

F

FFTGaussianLSF (class in mangadap.util.lineprofiles) file (mangadap.par.absorptionindexdb.AbsorptionIndexDB attribute) (mangadap.par.artifactdb.ArtifactDB attribute) (mangadap.par.bandheadindexdb.BandheadIndexDB attribute) (mangadap.par.emissionlinedb.EmissionLineDB attribute) (mangadap.par.emissionmomentsdb.EmissionMomentsDB attribute) (mangadap.par.spectralfeaturedb.SpectralFeatureDB attribute) file_list (mangadap.proc.templatelibrary.TemplateLibrary attribute) file_name (mangadap.config.manga.MaNGAConfig property) (mangadap.survey.dapall.DAPall property) (mangadap.survey.drpcomplete.DRPComplete property) file_name() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.reductionassessments.ReductionAssessment method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.proc.templatelibrary.TemplateLibrary method) file_path (mangadap.config.manga.MaNGAConfig property) (mangadap.datacube.datacube.DataCube property) (mangadap.survey.dapall.DAPall property) (mangadap.survey.drpcomplete.DRPComplete property) file_path() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.reductionassessments.ReductionAssessment method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.proc.templatelibrary.TemplateLibrary method) fill() (mangadap.proc.ppxffit.PPXFFitPar method) (mangadap.proc.sasuke.SasukePar method) (mangadap.proc.spatialbinning.RadialBinningPar method) (mangadap.proc.spatialbinning.VoronoiBinningPar method) fill_continuum_to_match() (mangadap.proc.emissionlinemodel.EmissionLineModel method) fill_guess_kinematics() (mangadap.proc.emissionlinetemplates.EmissionLineTemplates static method) fill_to_match() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) finalize_dap_header() (mangadap.util.fitsutil.DAPFitsUtil static method) finalize_dap_primary_header() (in module mangadap.dapfits) find() (mangadap.util.covariance.Covariance method) find_centereven() (in module mangadap.contrib.LambdaR_2D_forMaNGA) find_centerodd() (in module mangadap.contrib.LambdaR_2D_forMaNGA) find_nearest_bin() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) fit() (mangadap.proc.elric.Elric method) (mangadap.proc.elric.LineProfileFit method) (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.ppxffit.PPXFFit method) (mangadap.proc.rukia.Rukia method) (mangadap.proc.sasuke.Sasuke method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.util.vander.Vander1D method) fit_deriv() (mangadap.util.lineprofiles.GaussianLineProfile static method) fit_eml (mangadap.proc.sasuke.Sasuke attribute) fit_failed() (mangadap.proc.ppxffit.PPXFFitResult method) fit_figures_of_merit() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.sasuke.Sasuke static method) fit_SpatiallyBinnedSpectra() (mangadap.proc.elric.Elric method) (mangadap.proc.ppxffit.PPXFFit method) (mangadap.proc.sasuke.Sasuke method) FitChiSquare (class in mangadap.util.modeling) FitResiduals (class in mangadap.util.modeling) fitting_mask() (mangadap.proc.ppxffit.PPXFFit static method)

fitting_range() (mangadap.proc.rukia.Rukia method) fix_flux() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) fix_mean() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) fix_stddev() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) fixed (mangadap.proc.elric.LineProfileFit attribute) flagged() (mangadap.util.bitmask.BitMask method) flagged_bits() (mangadap.util.bitmask.BitMask method) float_dtype (mangadap.survey.dapall.DAPall attribute) flux (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) flux() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) flux_err() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) flux_stats() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) flux_to_fnu() (in module mangadap.proc.util) fluxhdr (mangadap.datacube.datacube.DataCube attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) FMExtinctionCoefficients (class in mangadap.util.extinction) from_array() (mangadap.util.covariance.Covariance class method) from_config() (mangadap.config.manga.MaNGAConfig class method) (mangadap.datacube.datacube.DataCube class method) (mangadap.datacube.manga.MaNGADataCube class method) (mangadap.par.parset.ParSet class method) (mangadap.spectra.manga.MaNGARSS class method) from_dict() (mangadap.par.parset.KeywordParSet class method) (mangadap.par.parset.ParSet class method) (mangadap.proc.emissionlinemodel.EmissionLineModelDef class method) (mangadap.proc.emissionlinemoments.EmissionLineMomentsDef class method) (mangadap.proc.ppxffit.PPXFFitPar class method) (mangadap.proc.sasuke.SasukePar class method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectraDef class method) (mangadap.proc.spectralindices.SpectralIndicesDef class method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModelDef class method) (mangadap.proc.templatelibrary.TemplateLibraryDef class method) from_file() (mangadap.config.manga.MaNGAConfig class method) from_fits() (mangadap.util.covariance.Covariance class method) from_fits_table() (mangadap.util.trace.TraceSet class method) from_header() (mangadap.par.parset.ParSet class method) (mangadap.util.bitmask.BitMask class method) from_ini_file() (mangadap.util.bitmask.BitMask class method) from_key() (mangadap.par.spectralfeaturedb.SpectralFeatureDB class method) (mangadap.proc.templatelibrary.TemplateLibraryDef class method) from_matrix_multiplication() (mangadap.util.covariance.Covariance class method) from_par_file() (mangadap.util.bitmask.BitMask class method) from_plateifu() (mangadap.datacube.manga.MaNGADataCube class method) (mangadap.spectra.manga.MaNGARSS class method) from_Rv() (mangadap.util.extinction.FMExtinctionCoefficients class method) from_samples() (mangadap.util.covariance.Covariance class method) from_toml() (mangadap.config.analysisplan.AnalysisPlan class method) from_variance() (mangadap.util.covariance.Covariance class method) fromheader() (mangadap.proc.elric.ElricPar method) (mangadap.proc.ppxffit.PPXFFitPar method) (mangadap.proc.spatialbinning.RadialBinningPar method) (mangadap.proc.spatialbinning.SquareBinningPar method) (mangadap.proc.spatialbinning.VoronoiBinningPar method) (mangadap.proc.spectralstack.SpectralStackPar method) full() (mangadap.util.covariance.Covariance method)

G

GalacticExtinction (class in mangadap.util.extinction) GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method) GaussianLineProfile (class in mangadap.util.lineprofiles) GaussianLSF (class in mangadap.util.lineprofiles) get() (mangadap.util.parser.DefaultConfig method) get_bin_indices() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) Get_CornersArray() (in module mangadap.contrib.LambdaR_2D_forMaNGA) get_database_key() (in module mangadap.proc.util) get_file_list() (mangadap.proc.templatelibrary.TemplateLibraryDef method) get_manga_environ() (in module mangadap.config) get_mask_array_from_cube() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) get_parset_list() (in module mangadap.par.util) get_python_versions() (in module mangadap.config)

get_spatial_shape() (mangadap.util.fitsutil.DAPFitsUtil static method) get_spectra_to_fit() (mangadap.proc.spectralfitting.EmissionLineFit static method) get_template_library() (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) getbool() (mangadap.util.parser.DefaultConfig method) getfloat() (mangadap.util.parser.DefaultConfig method) getint() (mangadap.util.parser.DefaultConfig method) getlist() (mangadap.util.parser.DefaultConfig method) gh_limits (mangadap.proc.sasuke.Sasuke attribute) GlobalBinning (class in mangadap.proc.spatialbinning) grid_borders() (in module mangadap.util.sampling) grid_centers() (in module mangadap.util.sampling) grid_npix() (in module mangadap.util.sampling) growth_lim() (in module mangadap.proc.util) guess_regular_grid() (in module mangadap.contrib.LambdaR_2D_forMaNGA)

H

h (mangadap.survey.dapall.DAPall attribute) H0 (mangadap.survey.dapall.DAPall attribute) hard (mangadap.survey.rundap.rundap attribute) hardcopy (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) has_template (mangadap.proc.rukia.Rukia property)

hdu (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) HDUList_mask_wavelengths() (in module mangadap.proc.util) high_pass_filter() (in module mangadap.util.filter)

I

ifudesign (mangadap.survey.dapall.DAPall attribute) ifudesignlist (mangadap.survey.drpcomplete.DRPComplete attribute) (mangadap.survey.rundap.rundap attribute) image_path (mangadap.config.manga.MaNGAConfig property) index (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) index_bf (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) index_bf_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) index_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) info() (mangadap.par.parset.ParSet method) (mangadap.proc.reductionassessments.ReductionAssessment method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.util.bitmask.BitMask method) init() (mangadap.util.datatable.DataTable method) init_DAP_logging() (in module mangadap.util.log) init_datatable() (mangadap.proc.spectralfitting.EmissionLineFit static method) (mangadap.proc.spectralfitting.StellarKinematicsFit static method) init_record_array() (in module mangadap.util.fileio) initialize_dap_primary_header() (mangadap.util.fitsutil.DAPFitsUtil static method) initialize_model_mask() (mangadap.proc.ppxffit.PPXFFit static method) initialize_pixels_to_fit() (mangadap.proc.ppxffit.PPXFFit static method) input_cz (mangadap.proc.sasuke.Sasuke attribute) input_indx (mangadap.util.covariance.Covariance attribute)

input_obj_mask (mangadap.proc.sasuke.Sasuke attribute) inputs (mangadap.util.lineprofiles.GaussianLineProfile attribute) instrument (mangadap.config.manga.MaNGAConfig attribute) (mangadap.datacube.datacube.DataCube attribute) instrumental_dispersion() (mangadap.proc.spectralfitting.EmissionLineFit static method) (mangadap.util.resolution.SpectralResolution method) instrumental_dispersion_plane() (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) integral() (mangadap.util.lineprofiles.GaussianLineProfile static method) IntegratedGaussianLSF (class in mangadap.util.lineprofiles) interp_value_fromR() (in module mangadap.contrib.LambdaR_2D_forMaNGA) interpolate_masked_vector() (in module mangadap.util.filter) interpolate_to_match() (mangadap.datacube.datacube.DataCube method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) interpolator (mangadap.util.resolution.SpectralResolution attribute) inv (mangadap.util.covariance.Covariance attribute) inverse() (in module mangadap.proc.util) is_correlation (mangadap.util.covariance.Covariance attribute) is_number() (in module mangadap.util.misc) is_unbinned (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra property) iteration_modes() (mangadap.proc.ppxffit.PPXFFit static method) ivar (mangadap.datacube.datacube.DataCube attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute)

K

kernel (mangadap.util.resolution.VariableGaussianKernel attribute) key (mangadap.par.absorptionindexdb.AbsorptionIndexDB attribute) (mangadap.par.artifactdb.ArtifactDB attribute) (mangadap.par.bandheadindexdb.BandheadIndexDB attribute) (mangadap.par.emissionlinedb.EmissionLineDB attribute) (mangadap.par.emissionmomentsdb.EmissionMomentsDB attribute) (mangadap.par.spectralfeaturedb.SpectralFeatureDB attribute)

keys (mangadap.util.datatable.DataTable attribute) keys() (mangadap.config.analysisplan.AnalysisPlan method) (mangadap.par.parset.ParDatabase method) (mangadap.par.parset.ParSet method) (mangadap.util.bitmask.BitMask method) keyword_specified() (mangadap.util.parser.DefaultConfig method) KeywordParSet (class in mangadap.par.parset)

L

label (mangadap.survey.rundap.rundap attribute) Legendre1D (class in mangadap.util.vander) LegendrePolynomial (class in mangadap.proc.rukia) library (mangadap.proc.templatelibrary.TemplateLibrary attribute) line_coeff() (in module mangadap.util.misc) line_metrics() (mangadap.proc.spectralfitting.EmissionLineFit static method) LineProfileFit (class in mangadap.proc.elric) list_of_image_hdus() (mangadap.util.fitsutil.DAPFitsUtil static method) list_to_csl_string() (in module mangadap.util.parser) LMC2ExtinctionCoefficients (class in mangadap.util.extinction) load_object() (in module mangadap.util.pkg) load_rss() (mangadap.datacube.datacube.DataCube method) (mangadap.datacube.manga.MaNGADataCube method) log (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) (mangadap.survey.rundap.rundap attribute)

log10 (mangadap.util.resolution.SpectralResolution attribute) log10_sampling (mangadap.proc.templatelibrary.TemplateLibrary attribute) log_output() (in module mangadap.util.log) loggers (mangadap.proc.emissionlinemoments.EmissionLineMoments attribute) (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.sasuke.Sasuke attribute) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra attribute) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel attribute) (mangadap.survey.dapall.DAPall attribute) losvd_limits() (mangadap.proc.ppxffit.PPXFFit static method)

M

m (mangadap.util.resolution.VariableGaussianKernel attribute) (mangadap.util.sampling.Resample attribute) main_continuum (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) main_continuum_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) main_empty (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) main_flux (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) main_flux_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) main_incomplete (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) manga_dap() (in module mangadap.survey.manga_dap) manga_fits_root() (in module mangadap.config.manga) MaNGAAnalysisPlan (class in mangadap.config.manga) MaNGAConfig (class in mangadap.config.manga) mangadap module mangadap.config module mangadap.config.analysisplan module mangadap.config.defaults module mangadap.config.manga module mangadap.contrib module mangadap.contrib.LambdaR_2D_forMaNGA module mangadap.contrib.xjmc module mangadap.dapfits module mangadap.datacube module mangadap.datacube.datacube module mangadap.datacube.manga module mangadap.par module mangadap.par.absorptionindexdb module mangadap.par.artifactdb module mangadap.par.bandheadindexdb module mangadap.par.emissionlinedb module mangadap.par.emissionmomentsdb module mangadap.par.parset module mangadap.par.spectralfeaturedb module mangadap.par.util module mangadap.proc module mangadap.proc.bandpassfilter module mangadap.proc.elric module mangadap.proc.emissionlinemodel module mangadap.proc.emissionlinemoments module mangadap.proc.emissionlinetemplates module mangadap.proc.ppxffit module mangadap.proc.reductionassessments module mangadap.proc.rukia module mangadap.proc.sasuke module mangadap.proc.spatialbinning module mangadap.proc.spatiallybinnedspectra module mangadap.proc.spectralfitting module mangadap.proc.spectralindices module mangadap.proc.spectralstack module mangadap.proc.stellarcontinuummodel module mangadap.proc.templatelibrary module mangadap.proc.util module mangadap.spectra module mangadap.spectra.manga module mangadap.spectra.rowstackedspectra module mangadap.survey module mangadap.survey.dapall module mangadap.survey.drpcomplete module mangadap.survey.manga_dap module mangadap.survey.rundap module mangadap.util module mangadap.util.bitmask module mangadap.util.constants module mangadap.util.covariance module mangadap.util.dapbitmask module mangadap.util.datatable module mangadap.util.drpbitmask module mangadap.util.extinction module mangadap.util.fileio module mangadap.util.filter module mangadap.util.fitsutil module mangadap.util.geometry module mangadap.util.lineprofiles module mangadap.util.log module mangadap.util.mapping module mangadap.util.misc module mangadap.util.modeling module mangadap.util.parser module

mangadap.util.pixelmask module mangadap.util.pkg module mangadap.util.resolution module mangadap.util.sampling module mangadap.util.trace module mangadap.util.vander module mangadap.version module MaNGADataCube (class in mangadap.datacube.manga) MaNGARSS (class in mangadap.spectra.manga) map_beam_patch() (in module mangadap.util.mapping) map_center_pixel_offset() (in module mangadap.util.mapping) map_extent() (in module mangadap.util.mapping) map_quantity() (in module mangadap.util.mapping) maps_bm (mangadap.survey.dapall.DAPall attribute) marginalize_mask() (mangadap.util.fitsutil.DAPFitsUtil static method) mask (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.elric.LineProfileFit attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) (mangadap.util.filter.BoxcarFilter property) masked_pixelized_image() (in module mangadap.util.mapping) match() (mangadap.util.resolution.SpectralResolution method) match_image_naxis() (mangadap.util.fitsutil.DAPFitsUtil static method) match_map_arrays() (in module mangadap.util.mapping) match_spectral_resolution() (in module mangadap.util.resolution) matched_kinematics() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) max_value (mangadap.util.bitmask.BitMask attribute) mdegree (mangadap.proc.sasuke.Sasuke attribute) mean (mangadap.util.lineprofiles.GaussianLineProfile attribute) mean_indx() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) mean_sky_coordinates() (mangadap.datacube.datacube.DataCube method) (mangadap.datacube.manga.MaNGADataCube method) (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) measure() (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spectralindices.SpectralIndices method) measure_equivalent_width() (mangadap.proc.spectralfitting.EmissionLineFit static method) measure_indices() (mangadap.proc.spectralindices.SpectralIndices static method) measure_moments() (mangadap.proc.emissionlinemoments.EmissionLineMoments static method) meta (mangadap.datacube.datacube.DataCube attribute) metakeys() (mangadap.datacube.datacube.DataCube method) method (mangadap.proc.reductionassessments.ReductionAssessment attribute) method_database() (mangadap.survey.dapall.DAPall method) method_path() (mangadap.config.analysisplan.AnalysisPlan method) (mangadap.config.manga.MaNGAAnalysisPlan method) methods (mangadap.survey.dapall.DAPall attribute) min_max_wave() (mangadap.proc.spectralstack.SpectralStack static method) min_sig (mangadap.util.resolution.SpectralResolution attribute) minimum_dtype() (mangadap.util.bitmask.BitMask method) model (mangadap.proc.elric.LineProfileFit attribute) model() (mangadap.proc.rukia.Rukia method) (mangadap.util.vander.Vander1D method) model_cubes() (mangadap.dapfits.construct_cube_file method) module mangadap mangadap.config mangadap.config.analysisplan mangadap.config.defaults mangadap.config.manga mangadap.contrib mangadap.contrib.LambdaR_2D_forMaNGA mangadap.contrib.xjmc mangadap.dapfits mangadap.datacube mangadap.datacube.datacube mangadap.datacube.manga mangadap.par mangadap.par.absorptionindexdb mangadap.par.artifactdb mangadap.par.bandheadindexdb mangadap.par.emissionlinedb mangadap.par.emissionmomentsdb mangadap.par.parset mangadap.par.spectralfeaturedb mangadap.par.util mangadap.proc mangadap.proc.bandpassfilter mangadap.proc.elric mangadap.proc.emissionlinemodel mangadap.proc.emissionlinemoments mangadap.proc.emissionlinetemplates mangadap.proc.ppxffit mangadap.proc.reductionassessments mangadap.proc.rukia mangadap.proc.sasuke mangadap.proc.spatialbinning mangadap.proc.spatiallybinnedspectra mangadap.proc.spectralfitting mangadap.proc.spectralindices mangadap.proc.spectralstack mangadap.proc.stellarcontinuummodel mangadap.proc.templatelibrary mangadap.proc.util mangadap.spectra mangadap.spectra.manga mangadap.spectra.rowstackedspectra mangadap.survey mangadap.survey.dapall mangadap.survey.drpcomplete mangadap.survey.manga_dap mangadap.survey.rundap mangadap.util mangadap.util.bitmask mangadap.util.constants mangadap.util.covariance mangadap.util.dapbitmask mangadap.util.datatable mangadap.util.drpbitmask mangadap.util.extinction mangadap.util.fileio mangadap.util.filter mangadap.util.fitsutil mangadap.util.geometry mangadap.util.lineprofiles mangadap.util.log mangadap.util.mapping mangadap.util.misc mangadap.util.modeling mangadap.util.parser mangadap.util.pixelmask mangadap.util.pkg mangadap.util.resolution mangadap.util.sampling mangadap.util.trace mangadap.util.vander mangadap.version module_logging() (in module mangadap.util.log) moment() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) moment_err() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) mpl (mangadap.survey.rundap.rundap attribute) mul_par() (mangadap.proc.rukia.Rukia method)

N

nbits (mangadap.util.bitmask.BitMask attribute) ncomp (mangadap.proc.sasuke.Sasuke attribute) NCompLineProfile (class in mangadap.util.lineprofiles) ndap (mangadap.survey.dapall.DAPall attribute) neml (mangadap.par.emissionlinedb.EmissionLineDB property) (mangadap.proc.sasuke.Sasuke attribute) (mangadap.survey.dapall.DAPall attribute) nfitpar (mangadap.proc.elric.LineProfileFit attribute) nfree_kin (mangadap.proc.sasuke.Sasuke attribute) nindx (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) (mangadap.survey.dapall.DAPall attribute) nlines (mangadap.proc.elric.LineProfileFit attribute) nnz (mangadap.util.covariance.Covariance attribute) nobj (mangadap.proc.sasuke.Sasuke attribute) nobs (mangadap.survey.drpcomplete.DRPComplete attribute)

nodes (mangadap.survey.rundap.rundap attribute) npar (mangadap.par.parset.ParSet attribute) (mangadap.proc.elric.LineProfileFit attribute) npar() (mangadap.util.lineprofiles.GaussianLSF static method) npar_kin (mangadap.proc.sasuke.Sasuke attribute) npix_obj (mangadap.proc.sasuke.Sasuke attribute) npix_tpl (mangadap.proc.sasuke.Sasuke attribute) nspec (mangadap.datacube.datacube.DataCube property) (mangadap.spectra.rowstackedspectra.RowStackedSpectra property) nstpl (mangadap.proc.sasuke.Sasuke attribute) ntpl (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.proc.sasuke.Sasuke attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) nwave (mangadap.datacube.datacube.DataCube attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute)

O

obj_ferr (mangadap.proc.sasuke.Sasuke attribute) obj_flux (mangadap.proc.sasuke.Sasuke attribute) obj_sres (mangadap.proc.sasuke.Sasuke attribute) obj_to_fit (mangadap.proc.sasuke.Sasuke attribute) obj_tpl_pixelmatch() (mangadap.proc.ppxffit.PPXFFit static method) obj_wave (mangadap.proc.sasuke.Sasuke attribute) off_diagonal_identity() (in module mangadap.util.filter) offset_GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method) on_disk (mangadap.survey.rundap.rundap attribute) operation_options() (mangadap.proc.spectralstack.SpectralStack static method) optimal_scale() (in module mangadap.proc.util) options (mangadap.par.parset.ParSet attribute) order (mangadap.util.vander.Vander1D property)

original_axes (mangadap.datacube.datacube.DataCube attribute) outborders (mangadap.util.sampling.Resample attribute) oute (mangadap.util.sampling.Resample attribute) outf (mangadap.util.sampling.Resample attribute) output_file (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) output_hdus() (mangadap.util.covariance.Covariance method) output_path (mangadap.proc.reductionassessments.ReductionAssessment attribute) output_root (mangadap.config.manga.MaNGAConfig property) (mangadap.datacube.datacube.DataCube property) outputs (mangadap.util.lineprofiles.GaussianLineProfile attribute) outx (mangadap.util.sampling.Resample attribute) outy (mangadap.util.sampling.Resample attribute) overwrite (mangadap.survey.rundap.rundap attribute)

P

p (mangadap.util.lineprofiles.FFTGaussianLSF attribute) (mangadap.util.lineprofiles.GaussianLSF attribute) (mangadap.util.lineprofiles.IntegratedGaussianLSF attribute) (mangadap.util.resolution.VariableGaussianKernel attribute) pa (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.util.geometry.SemiMajorAxisCoo attribute) par (mangadap.proc.elric.LineProfileFit attribute) param_names (mangadap.util.lineprofiles.GaussianLineProfile attribute) parameters_from_moments() (mangadap.util.lineprofiles.GaussianLSF method) ParDatabase (class in mangadap.par.parset) parse() (mangadap.config.analysisplan.AnalysisPlan method) parse_bits_from_hdr() (mangadap.util.bitmask.BitMask static method) parse_covariance_parameters() (mangadap.proc.spectralstack.SpectralStack static method) parse_par_from_hdr() (mangadap.par.parset.ParSet static method) parse_plate_ifu_from_file() (in module mangadap.config.manga) ParSet (class in mangadap.par.parset) passband_integral() (in module mangadap.proc.bandpassfilter) passband_integrated_mean() (in module mangadap.proc.bandpassfilter) passband_integrated_width() (in module mangadap.proc.bandpassfilter) passband_median() (in module mangadap.proc.bandpassfilter) passband_weighted_mean() (in module mangadap.proc.bandpassfilter) passband_weighted_sdev() (in module mangadap.proc.bandpassfilter) permute_wcs_axes() (in module mangadap.util.mapping) photometry_fix_file() (in module mangadap.config.manga) PieceWiseLinear (class in mangadap.proc.rukia) pixel (mangadap.util.lineprofiles.FFTGaussianLSF attribute) pixel_fraction_in_passband() (in module mangadap.proc.bandpassfilter) PixelMask (class in mangadap.util.pixelmask) pixelscale (mangadap.datacube.datacube.DataCube attribute) plan (mangadap.survey.rundap.rundap attribute) plan_file (mangadap.survey.rundap.rundap attribute)

plate (mangadap.survey.dapall.DAPall attribute) plate_target_files() (in module mangadap.config.manga) platelist (mangadap.survey.drpcomplete.DRPComplete attribute) (mangadap.survey.rundap.rundap attribute) pltifu_plots (mangadap.survey.rundap.rundap attribute) point_inside_polygon() (in module mangadap.util.geometry) pointing_offset() (mangadap.spectra.manga.MaNGARSS method) polar() (mangadap.util.geometry.SemiMajorAxisCoo method) polar_invert() (mangadap.util.geometry.SemiMajorAxisCoo method) polygon_area() (in module mangadap.util.geometry) polygon_winding_number() (in module mangadap.util.geometry) populate_metadata() (mangadap.datacube.datacube.DataCube method) post_plots (mangadap.survey.rundap.rundap attribute) post_process (mangadap.survey.rundap.rundap attribute) ppxf_tied_parameters() (in module mangadap.contrib.xjmc) ppxf_tpl_obj_voff() (mangadap.proc.ppxffit.PPXFFit static method) ppxf_vsyst() (in module mangadap.contrib.xjmc) PPXFFit (class in mangadap.proc.ppxffit) PPXFFitPar (class in mangadap.proc.ppxffit) PPXFFitResult (class in mangadap.proc.ppxffit) PPXFModel (class in mangadap.proc.ppxffit) prefix (mangadap.par.parset.ParSet attribute) (mangadap.util.bitmask.BitMask attribute) prihdr (mangadap.datacube.datacube.DataCube attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) print_version (mangadap.survey.rundap.rundap attribute) process_template_library() (mangadap.proc.templatelibrary.TemplateLibrary method) processed (mangadap.proc.templatelibrary.TemplateLibrary attribute) projected_polar() (in module mangadap.util.geometry) propagate_flags() (mangadap.config.manga.MaNGAConfig static method) (mangadap.datacube.datacube.DataCube static method) pseudocontinuum() (in module mangadap.proc.bandpassfilter)

Q

q (mangadap.survey.rundap.rundap attribute) qos (mangadap.survey.rundap.rundap attribute) quiet (mangadap.proc.emissionlinemoments.EmissionLineMoments attribute) (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.sasuke.Sasuke attribute) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra attribute) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel attribute) (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.rundap.rundap attribute)

R

rad2arcs (mangadap.util.constants.DAPConstants attribute) RadialBinning (class in mangadap.proc.spatialbinning) RadialBinningPar (class in mangadap.proc.spatialbinning) raw_shape (mangadap.util.covariance.Covariance attribute) rcond (mangadap.util.vander.Vander1D attribute) reached_maxiter() (mangadap.proc.ppxffit.PPXFFitResult method) read() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.util.fitsutil.DAPFitsUtil static method) (mangadap.util.parser.DefaultConfig method) read_raw_template_library() (mangadap.proc.templatelibrary.TemplateLibrary method) read_template_spectrum() (in module mangadap.util.fileio) readfits_1dspec() (in module mangadap.util.fileio) readonly (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) rec_to_fits_col_dim() (in module mangadap.util.fileio) rec_to_fits_type() (in module mangadap.util.fileio) reconstruct_cube() (mangadap.util.fitsutil.DAPFitsUtil static method) reconstruct_map() (mangadap.util.fitsutil.DAPFitsUtil static method) Rectangle_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA) rectification_transfer_matrix() (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) rectify_wavelength_plane() (mangadap.spectra.manga.MaNGARSS method) (mangadap.spectra.rowstackedspectra.RowStackedSpectra method) recursive_dict_evaluate() (in module mangadap.par.util) recursive_dict_str_to_None() (in module mangadap.par.util) red_center (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) red_continuum (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) red_continuum_err (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) red_empty (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) red_incomplete (mangadap.proc.spectralindices.AbsorptionLineIndices attribute) reddening (mangadap.proc.sasuke.Sasuke attribute) reddening_vector_calzetti() (in module mangadap.util.extinction) reddening_vector_ccm() (in module mangadap.util.extinction) reddening_vector_fm() (in module mangadap.util.extinction) redshift_fix_file() (in module mangadap.config.manga)

redshift_to_Newtonian_velocity() (mangadap.util.fitsutil.DAPFitsUtil static method) reduction_assessment_maps() (mangadap.dapfits.construct_maps_file method) ReductionAssessment (class in mangadap.proc.reductionassessments) ReductionAssessmentDataTable (class in mangadap.proc.reductionassessments) ReductionAssessmentDef (class in mangadap.proc.reductionassessments) redux_path (mangadap.survey.dapall.DAPall attribute) (mangadap.survey.drpcomplete.DRPComplete attribute) (mangadap.survey.rundap.rundap attribute) reff (mangadap.proc.reductionassessments.ReductionAssessment attribute) register() (mangadap.proc.spectralstack.SpectralStack static method) regrid_rlim() (mangadap.config.manga.MaNGAConfig static method) regrid_sigma() (mangadap.config.manga.MaNGAConfig static method) reinit_profiles() (mangadap.proc.elric.ElricFittingWindow method) rej_flag (mangadap.proc.ppxffit.PPXFFit attribute) reject_boxcar (mangadap.proc.sasuke.Sasuke attribute) reject_model_outliers() (mangadap.proc.ppxffit.PPXFFit static method) reject_residuals_1d() (in module mangadap.util.modeling) replace_with_data_from_nearest_bin() (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) replace_with_data_from_nearest_coo() (in module mangadap.proc.util) report_progress (mangadap.survey.rundap.rundap attribute) Resample (class in mangadap.util.sampling) reset_continuum_mask_window() (mangadap.proc.stellarcontinuummodel.StellarContinuumModel static method) reset_init_mean() (mangadap.proc.elric.ElricFittingWindow method) reset_range() (mangadap.proc.rukia.LegendrePolynomial method) (mangadap.proc.rukia.PieceWiseLinear method) reset_rng() (mangadap.proc.rukia.ScaledEmpirical method) result (mangadap.proc.elric.LineProfileFit attribute) revert_correlation() (mangadap.util.covariance.Covariance method) revert_velocity() (mangadap.proc.ppxffit.PPXFFit static method) rng_flag (mangadap.proc.ppxffit.PPXFFit attribute) rot (mangadap.util.geometry.SemiMajorAxisCoo attribute) rotate() (in module mangadap.util.geometry) Rotate_Corners() (in module mangadap.contrib.LambdaR_2D_forMaNGA) rotPA() (in module mangadap.contrib.LambdaR_2D_forMaNGA) RowStackedSpectra (class in mangadap.spectra.rowstackedspectra) rss (mangadap.datacube.datacube.DataCube attribute) Rukia (class in mangadap.proc.rukia) RukiaBitMask (class in mangadap.proc.rukia) rundap (class in mangadap.survey.rundap)

S

sample() (mangadap.proc.elric.LineProfileFit method) (mangadap.util.lineprofiles.FFTGaussianLSF method) (mangadap.util.lineprofiles.GaussianLSF method) (mangadap.util.lineprofiles.IntegratedGaussianLSF method) (mangadap.util.lineprofiles.NCompLineProfile method) (mangadap.util.trace.TraceSet method) sample_growth() (in module mangadap.proc.util) Sasuke (class in mangadap.proc.sasuke) SasukeFitDataTable (class in mangadap.proc.sasuke) SasukePar (class in mangadap.proc.sasuke) save_results() (mangadap.proc.spectralindices.SpectralIndices static method) scale_flux() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) scale_stddev() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) scaled_coordinates() (in module mangadap.util.modeling) ScaledEmpirical (class in mangadap.proc.rukia) sdss_maskbits_file() (in module mangadap.config.defaults) select() (mangadap.contrib.LambdaR_2D_forMaNGA.Circle_Zone method) (mangadap.contrib.LambdaR_2D_forMaNGA.Rectangle_Zone method) select_binned_spectra_to_fit() (mangadap.proc.spectralfitting.EmissionLineFit static method) select_database() (in module mangadap.proc.util) select_proc_method() (in module mangadap.proc.util) select_spaxels() (in module mangadap.contrib.LambdaR_2D_forMaNGA) select_spaxels_to_fit() (mangadap.proc.spectralfitting.EmissionLineFit static method) Selection_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA) SemiMajorAxisCoo (class in mangadap.util.geometry) set_flux() (mangadap.util.lineprofiles.NCompLineProfile method) set_masks() (mangadap.proc.spectralindices.SpectralIndices static method) set_mean() (mangadap.util.lineprofiles.NCompLineProfile method) set_par() (mangadap.util.lineprofiles.GaussianLSF method) set_pltifu_status() (mangadap.survey.rundap.rundap method) set_status() (mangadap.survey.rundap.rundap method) set_stddev() (mangadap.util.lineprofiles.NCompLineProfile method) set_wavelength_range() (mangadap.proc.ppxffit.PPXFFit static method) sgrp (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) shape (mangadap.datacube.datacube.DataCube attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) (mangadap.util.covariance.Covariance attribute) (mangadap.util.datatable.DataTable property) (mangadap.util.pixelmask.PixelMask attribute) (mangadap.util.vander.Vander1D property) shift_mean() (mangadap.util.lineprofiles.GaussianLineProfile static method) (mangadap.util.lineprofiles.NCompLineProfile method) shifted_wave() (mangadap.proc.rukia.Rukia method) short_warning() (in module mangadap.util.log) show() (mangadap.util.covariance.Covariance method) sideband_pseudocontinua() (mangadap.proc.emissionlinemoments.EmissionLineMoments static method) sidereal_year (mangadap.util.constants.DAPConstants attribute) sig2fwhm (mangadap.util.constants.DAPConstants attribute) sig_mask (mangadap.util.resolution.SpectralResolution attribute) sig_pd (mangadap.util.resolution.SpectralResolution attribute) sig_vo (mangadap.util.resolution.SpectralResolution attribute) sigma (mangadap.util.lineprofiles.GaussianLineProfile attribute) (mangadap.util.resolution.VariableGaussianKernel attribute) sigma_inst (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) sigma_limits (mangadap.proc.sasuke.Sasuke attribute) sigma_par() (mangadap.proc.rukia.Rukia method) sigma_rho (mangadap.datacube.datacube.DataCube attribute) single_band_moments() (mangadap.proc.emissionlinemoments.EmissionLineMoments static method) single_spec_to_fits() (mangadap.proc.templatelibrary.TemplateLibrary method) size (mangadap.par.absorptionindexdb.AbsorptionIndexDB attribute) (mangadap.par.artifactdb.ArtifactDB attribute) (mangadap.par.bandheadindexdb.BandheadIndexDB attribute) (mangadap.par.emissionlinedb.EmissionLineDB attribute) (mangadap.par.emissionmomentsdb.EmissionMomentsDB attribute) (mangadap.par.spectralfeaturedb.SpectralFeatureDB attribute) (mangadap.util.datatable.DataTable property) (mangadap.util.vander.Vander1D property)

smooth() (mangadap.util.filter.BoxcarFilter method) smooth_masked_vector() (in module mangadap.util.filter) sn_calculation_calibrate_noise() (mangadap.proc.spatialbinning.VoronoiBinning method) sn_calculation_covariance_matrix() (mangadap.proc.spatialbinning.VoronoiBinning method) sn_calculation_no_covariance() (mangadap.proc.spatialbinning.VoronoiBinning method) snr_flag (mangadap.proc.ppxffit.PPXFFit attribute) solve() (mangadap.util.geometry.SemiMajorAxisCoo method) solve_inverse() (mangadap.util.geometry.SemiMajorAxisCoo method) spatial_index (mangadap.datacube.datacube.DataCube attribute) spatial_shape (mangadap.datacube.datacube.DataCube attribute) SpatialBinning (class in mangadap.proc.spatialbinning) SpatiallyBinnedSpectra (class in mangadap.proc.spatiallybinnedspectra) SpatiallyBinnedSpectraBitMask (class in mangadap.proc.spatiallybinnedspectra) SpatiallyBinnedSpectraDataTable (class in mangadap.proc.spatiallybinnedspectra) SpatiallyBinnedSpectraDef (class in mangadap.proc.spatiallybinnedspectra) spaxel_to_bin_covariance() (mangadap.util.covariance.Covariance method) spectra_for_index_measurements() (mangadap.proc.spectralindices.SpectralIndices static method) spectral_coordinate_step() (in module mangadap.util.sampling) spectral_index_maps() (mangadap.dapfits.construct_maps_file method) spectral_resolution() (mangadap.config.manga.MaNGAConfig static method) spectral_resolution_extension() (mangadap.config.manga.MaNGAConfig static method) spectral_step (mangadap.proc.templatelibrary.TemplateLibrary attribute) SpectralFeatureDB (class in mangadap.par.spectralfeaturedb) SpectralFitting (class in mangadap.proc.spectralfitting) SpectralIndices (class in mangadap.proc.spectralindices) SpectralIndicesBitMask (class in mangadap.proc.spectralindices) SpectralIndicesDataTable (class in mangadap.proc.spectralindices) SpectralIndicesDef (class in mangadap.proc.spectralindices) SpectralIndicesDefinitionTable (class in mangadap.proc.spectralindices) SpectralPixelMask (class in mangadap.util.pixelmask) SpectralResolution (class in mangadap.util.resolution) SpectralStack (class in mangadap.proc.spectralstack) SpectralStackPar (class in mangadap.proc.spectralstack) spectrum_end (mangadap.proc.sasuke.Sasuke attribute) spectrum_start (mangadap.proc.sasuke.Sasuke attribute) spectrum_velocity_scale() (in module mangadap.util.sampling) square_shape() (mangadap.util.covariance.Covariance static method) SquareBinning (class in mangadap.proc.spatialbinning) SquareBinningPar (class in mangadap.proc.spatialbinning) sres (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) sres() (mangadap.util.resolution.SpectralResolution method) stack() (mangadap.proc.spectralstack.SpectralStack method) stack_datacube() (mangadap.proc.spectralstack.SpectralStack method) stellar_continuum_maps() (mangadap.dapfits.construct_maps_file method) StellarContinuumModel (class in mangadap.proc.stellarcontinuummodel) StellarContinuumModelBitMask (class in mangadap.proc.stellarcontinuummodel) StellarContinuumModelDef (class in mangadap.proc.stellarcontinuummodel) StellarKinematicsFit (class in mangadap.proc.spectralfitting) StellarKinematicsFitDataTable (class in mangadap.proc.spectralfitting) storage_mode_options() (mangadap.util.fitsutil.DAPFitsUtil static method) str_len (mangadap.survey.dapall.DAPall attribute) submit (mangadap.survey.rundap.rundap attribute) subtract_continuum() (mangadap.proc.spectralfitting.EmissionLineFit static method) supported_libraries (mangadap.proc.templatelibrary.TemplateLibrary attribute) symlink_dir (mangadap.proc.reductionassessments.ReductionAssessment attribute) (mangadap.proc.templatelibrary.TemplateLibrary attribute) SymmetrizeField() (in module mangadap.contrib.LambdaR_2D_forMaNGA)

T

TemplateLibrary (class in mangadap.proc.templatelibrary) TemplateLibraryBitMask (class in mangadap.proc.templatelibrary) TemplateLibraryDef (class in mangadap.proc.templatelibrary) tie_flux() (mangadap.proc.elric.TiedLineProfile method) tie_index_match() (mangadap.par.emissionlinedb.EmissionLineDB method) tie_mean() (mangadap.proc.elric.TiedLineProfile method) tie_stddev() (mangadap.proc.elric.TiedLineProfile method) TiedLineProfile (class in mangadap.proc.elric) to_config() (mangadap.par.parset.ParSet method) to_correlation() (mangadap.util.covariance.Covariance method) to_datatable() (mangadap.par.emissionlinedb.EmissionLineDB method) (mangadap.par.emissionmomentsdb.EmissionMomentsDB method) to_dict() (mangadap.par.parset.ParSet method) to_hdu() (mangadap.util.datatable.DataTable method) to_header() (mangadap.par.parset.ParSet method) (mangadap.util.bitmask.BitMask method) to_rst_table() (mangadap.par.parset.ParSet method) (mangadap.util.bitmask.BitMask method) (mangadap.util.datatable.DataTable method) toarray() (mangadap.util.covariance.Covariance method) toggle() (mangadap.util.bitmask.BitMask method) toheader() (mangadap.proc.elric.ElricPar method) (mangadap.proc.ppxffit.PPXFFitPar method) (mangadap.proc.spatialbinning.RadialBinningPar method) (mangadap.proc.spatialbinning.SquareBinningPar method) (mangadap.proc.spatialbinning.VoronoiBinningPar method) (mangadap.proc.spectralstack.SpectralStackPar method)

tpl_comp (mangadap.proc.sasuke.Sasuke attribute) tpl_flag (mangadap.proc.ppxffit.PPXFFit attribute) tpl_flux (mangadap.proc.sasuke.Sasuke attribute) tpl_npad (mangadap.proc.sasuke.Sasuke attribute) tpl_rfft (mangadap.proc.sasuke.Sasuke attribute) tpl_sgrp (mangadap.proc.sasuke.Sasuke attribute) tpl_to_use (mangadap.proc.sasuke.Sasuke attribute) tpl_vgrp (mangadap.proc.sasuke.Sasuke attribute) tpl_wave (mangadap.proc.sasuke.Sasuke attribute) tpli (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) TraceSet (class in mangadap.util.trace) transpose_image_data() (mangadap.util.fitsutil.DAPFitsUtil static method) transpose_raw_shape() (mangadap.util.covariance.Covariance method) trunc_flag (mangadap.proc.ppxffit.PPXFFit attribute) turn_off() (mangadap.util.bitmask.BitMask method) turn_on() (mangadap.util.bitmask.BitMask method) type (mangadap.contrib.LambdaR_2D_forMaNGA.Circle_Zone attribute) (mangadap.contrib.LambdaR_2D_forMaNGA.Rectangle_Zone attribute) types (mangadap.util.datatable.DataTable attribute)

U

umask (mangadap.survey.rundap.rundap attribute) unique_bins() (mangadap.util.fitsutil.DAPFitsUtil static method) unit_selection() (mangadap.proc.spectralindices.SpectralIndices static method) units (mangadap.proc.spectralindices.AbsorptionLineIndices attribute)

unmasked_continuum_model() (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) unpack() (mangadap.util.bitmask.BitMask method) update() (mangadap.survey.dapall.DAPall method) (mangadap.survey.drpcomplete.DRPComplete method)

V

v (mangadap.util.vander.Vander1D attribute) valid_forms() (mangadap.util.extinction.GalacticExtinction static method) validate_keys() (mangadap.par.parset.ParSet method) Vander1D (class in mangadap.util.vander) var (mangadap.util.covariance.Covariance attribute) VariableGaussianKernel (class in mangadap.util.resolution) variance() (mangadap.util.covariance.Covariance method)

velocity_limits (mangadap.proc.sasuke.Sasuke attribute) velocity_offset (mangadap.proc.templatelibrary.TemplateLibrary attribute) velscale (mangadap.proc.sasuke.Sasuke attribute) velscale_ratio (mangadap.proc.sasuke.Sasuke attribute) vgrp (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) VoronoiBinning (class in mangadap.proc.spatialbinning) VoronoiBinningPar (class in mangadap.proc.spatialbinning)

W

walltime (mangadap.survey.rundap.rundap attribute) wave (mangadap.datacube.datacube.DataCube attribute) (mangadap.proc.emissionlinetemplates.EmissionLineTemplates attribute) (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) wave() (mangadap.util.resolution.SpectralResolution method) wavelength_vector() (in module mangadap.util.fileio) waverange (mangadap.util.pixelmask.SpectralPixelMask attribute) wcs (mangadap.datacube.datacube.DataCube attribute) write() (mangadap.proc.emissionlinemodel.EmissionLineModel method) (mangadap.proc.emissionlinemoments.EmissionLineMoments method) (mangadap.proc.spatiallybinnedspectra.SpatiallyBinnedSpectra method) (mangadap.proc.spectralindices.SpectralIndices method) (mangadap.proc.stellarcontinuummodel.StellarContinuumModel method) (mangadap.survey.drpcomplete.DRPComplete method) (mangadap.util.covariance.Covariance method) (mangadap.util.fitsutil.DAPFitsUtil static method)

write_compute_script() (mangadap.survey.rundap.rundap method) write_config() (mangadap.config.manga.MaNGAConfig static method) (mangadap.survey.drpcomplete.DRPComplete method) write_dapall_script() (mangadap.survey.rundap.rundap method) write_plate_qa_script() (mangadap.survey.rundap.rundap method) writefits_1dspec() (in module mangadap.util.fileio)

X

x (mangadap.proc.elric.LineProfileFit attribute) (mangadap.util.sampling.Resample attribute) (mangadap.util.vander.Vander1D attribute)

xborders (mangadap.util.sampling.Resample attribute) xpos (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute) XY_toSemiMajor() (in module mangadap.contrib.LambdaR_2D_forMaNGA)

Y

y (mangadap.proc.elric.LineProfileFit attribute) (mangadap.util.sampling.Resample attribute)

ypos (mangadap.spectra.rowstackedspectra.RowStackedSpectra attribute)

Z

zmom (mangadap.util.lineprofiles.GaussianLineProfile attribute)