Welcome!
What’s New in the DAP
DAP Known Issues
Usage
Installation
Execution
Development Guidelines
Methods
Data Analysis Pipeline Workflow
Spectral Template Libraries
Emission-Line Measurements
Spectral-Index Parameters
Spatial Covariance
Output
Getting started with DAP output data
Metadata Model
Data Model
MAPS Corrections
Quality Assessment Plots
Beyond MaNGA
How to Fit One Spectrum
How to Fit One Datacube
Utilities
Parameter Sets
Bitmasks
Covariance
Resampling
Spectral Resolution Matching
Smoothing
API
MaNGA DAP API
MaNGA DAP Modules
mangadap
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Index
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Index
_
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A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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S
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T
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V
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W
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X
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Y
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Z
_
_abc_cache (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_abc_negative_cache (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_abc_negative_cache_version (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_abc_registry (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_apply() (mangadap.util.filter.BoxcarFilter method)
_assign_par() (mangadap.util.filter.BoxcarFilter method)
_available_mpls() (mangadap.survey.mangampl.MaNGAMPL method)
_calculate_cartesian() (mangadap.util.geometry.SemiMajorAxisCoo method)
_calculate_polar() (mangadap.util.geometry.SemiMajorAxisCoo method)
_check_par() (mangadap.util.filter.BoxcarFilter method)
_check_shape() (mangadap.util.resolution.VariableGaussianKernel method)
_combine_stellar_templates() (in module mangadap.contrib.xjmc)
_convert_pd2vd() (mangadap.util.resolution.SpectralResolution method)
_convert_vd2pd() (mangadap.util.resolution.SpectralResolution method)
_create_a() (mangadap.util.resolution.VariableGaussianKernel method)
_defined() (mangadap.util.geometry.SemiMajorAxisCoo method)
_deredden_vec() (mangadap.util.extinction.GalacticExtinction method)
_eval_ignore() (in module mangadap.par.util)
_finalize_GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method)
_fit_iteration() (in module mangadap.contrib.xjmc)
_fix_inputs() (mangadap.util.lineprofiles.GaussianLineProfile method)
_input_coordinates() (mangadap.util.sampling.Resample method)
_interpolate() (mangadap.util.filter.BoxcarFilter method)
_is_dynamic (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_match_map_arrays_integer_pixel_shift() (in module mangadap.util.mapping)
_match_map_arrays_sub_pixel_shift() (in module mangadap.util.mapping)
_mom1_integrand() (mangadap.util.lineprofiles.NCompLineProfile method)
_mom2_integrand() (mangadap.util.lineprofiles.NCompLineProfile method)
_output_coordinates() (mangadap.util.sampling.Resample method)
_parameters_ (mangadap.util.lineprofiles.GaussianLineProfile attribute)
_pixel_borders() (in module mangadap.util.sampling)
_pixel_centers() (in module mangadap.util.sampling)
_ppxf_component_setup() (in module mangadap.contrib.xjmc)
_quick_sample() (mangadap.util.lineprofiles.NCompLineProfile method)
_redden_vec() (mangadap.util.extinction.GalacticExtinction method)
_reduce_indices() (mangadap.util.filter.BoxcarFilter method)
_reorder_solution() (in module mangadap.contrib.xjmc)
_resample_linear() (mangadap.util.sampling.Resample method)
_resample_step() (mangadap.util.sampling.Resample method)
_reset_components() (in module mangadap.contrib.xjmc)
_set_to_using_optimal_templates() (in module mangadap.contrib.xjmc)
_setA() (mangadap.util.geometry.SemiMajorAxisCoo method)
_setB() (mangadap.util.geometry.SemiMajorAxisCoo method)
_setC() (mangadap.util.geometry.SemiMajorAxisCoo method)
_setD() (mangadap.util.geometry.SemiMajorAxisCoo method)
_validate_templates_components() (in module mangadap.contrib.xjmc)
_version_mismatch() (mangadap.survey.mangampl.MaNGAMPL method)
A
A (mangadap.util.geometry.SemiMajorAxisCoo attribute)
accessver (mangadap.survey.mangampl.MaNGAMPL attribute)
adjusted_resolution() (mangadap.util.resolution.SpectralResolution method)
all_required() (mangadap.util.parser.DefaultConfig method)
Alu (mangadap.util.geometry.SemiMajorAxisCoo attribute)
angstroms_per_pixel() (in module mangadap.util.sampling)
Apiv (mangadap.util.geometry.SemiMajorAxisCoo attribute)
apply() (mangadap.util.extinction.GalacticExtinction method)
arginp_to_list() (in module mangadap.util.parser)
assign_err() (mangadap.util.lineprofiles.NCompLineProfile method)
assign_par() (mangadap.util.lineprofiles.NCompLineProfile method)
astropyver (mangadap.survey.mangampl.MaNGAMPL attribute)
AvgLMCExtinctionCoefficients (class in mangadap.util.extinction)
B
B (mangadap.util.geometry.SemiMajorAxisCoo attribute)
boxcar_smooth_vector() (in module mangadap.util.filter)
BoxcarFilter (class in mangadap.util.filter)
build_smoothing_mask() (in module mangadap.util.filter)
C
C (mangadap.util.geometry.SemiMajorAxisCoo attribute)
c (mangadap.util.resolution.SpectralResolution attribute)
calculate_noise() (in module mangadap.contrib.xjmc)
cartesian() (mangadap.util.geometry.SemiMajorAxisCoo method)
cartesian_invert() (mangadap.util.geometry.SemiMajorAxisCoo method)
channel_dictionary() (in module mangadap.util.fileio)
channel_units() (in module mangadap.util.fileio)
check_cross_pixel() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
check_environment() (in module mangadap)
check_environment_variable() (in module mangadap.util.exception_tools)
Circle_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA)
Clu (mangadap.util.geometry.SemiMajorAxisCoo attribute)
compress_file() (in module mangadap.util.fileio)
compute() (mangadap.util.extinction.GalacticExtinction method)
convolution_variable_sigma() (in module mangadap.util.resolution)
convolve() (mangadap.util.resolution.VariableGaussianKernel method)
coo() (mangadap.util.geometry.SemiMajorAxisCoo method)
corever (mangadap.survey.mangampl.MaNGAMPL attribute)
Cpiv (mangadap.util.geometry.SemiMajorAxisCoo attribute)
create_symlink() (in module mangadap.util.fileio)
D
D (mangadap.util.geometry.SemiMajorAxisCoo attribute)
dap_source_dir() (in module mangadap)
(in module mangadap.config.defaults)
DAPConstants (class in mangadap.util.constants)
dapver (mangadap.survey.mangampl.MaNGAMPL attribute)
default_analysis_path() (in module mangadap.config.defaults)
default_calzetti_rv() (in module mangadap.util.extinction)
default_ccm_rv() (in module mangadap.util.extinction)
default_cube_pixelscale() (in module mangadap.config.defaults)
default_cube_recenter() (in module mangadap.config.defaults)
default_cube_width_buffer() (in module mangadap.config.defaults)
default_dap_common_path() (in module mangadap.config.defaults)
default_dap_file_name() (in module mangadap.config.defaults)
default_dap_file_root() (in module mangadap.config.defaults)
default_dap_method() (in module mangadap.config.defaults)
default_dap_method_path() (in module mangadap.config.defaults)
default_dap_par_file() (in module mangadap.config.defaults)
default_dap_plan_file() (in module mangadap.config.defaults)
default_dap_version() (in module mangadap.config.defaults)
default_dapall_file() (in module mangadap.config.defaults)
default_drp_directory_path() (in module mangadap.config.defaults)
default_drp_version() (in module mangadap.config.defaults)
default_drpall_file() (in module mangadap.config.defaults)
default_fm_rv() (in module mangadap.util.extinction)
default_manga_fits_root() (in module mangadap.config.defaults)
default_paths() (in module mangadap)
default_plate_target_files() (in module mangadap.config.defaults)
default_redshift_fix_file() (in module mangadap.config.defaults)
default_redux_path() (in module mangadap.config.defaults)
default_regrid_rlim() (in module mangadap.config.defaults)
default_regrid_sigma() (in module mangadap.config.defaults)
DefaultConfig (class in mangadap.util.parser)
Derive_LR_VS_Profiles() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
derive_unbinned_field() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
dist2() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
drpver (mangadap.survey.mangampl.MaNGAMPL attribute)
dv (mangadap.util.resolution.SpectralResolution attribute)
dw (mangadap.util.resolution.SpectralResolution attribute)
dx (mangadap.util.lineprofiles.FFTGaussianLSF attribute)
(mangadap.util.lineprofiles.IntegratedGaussianLSF attribute)
E
e (mangadap.util.sampling.Resample attribute)
ell (mangadap.util.geometry.SemiMajorAxisCoo attribute)
emline_fitter_with_ppxf() (in module mangadap.contrib.xjmc)
evaluate() (mangadap.util.lineprofiles.GaussianLineProfile static method)
F
FFTGaussianLSF (class in mangadap.util.lineprofiles)
find_centereven() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
find_centerodd() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
fit_deriv() (mangadap.util.lineprofiles.GaussianLineProfile static method)
fix_flux() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
fix_mean() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
fix_stddev() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
flux() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
flux_err() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
flux_to_fnu() (in module mangadap.proc.util)
FMExtinctionCoefficients (class in mangadap.util.extinction)
from_Rv() (mangadap.util.extinction.FMExtinctionCoefficients class method)
G
GalacticExtinction (class in mangadap.util.extinction)
GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method)
GaussianLineProfile (class in mangadap.util.lineprofiles)
GaussianLSF (class in mangadap.util.lineprofiles)
get() (mangadap.util.parser.DefaultConfig method)
Get_CornersArray() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
get_database_key() (in module mangadap.proc.util)
get_environment_versions() (mangadap.survey.mangampl.MaNGAMPL method)
get_parset_list() (in module mangadap.par.util)
getbool() (mangadap.util.parser.DefaultConfig method)
getfloat() (mangadap.util.parser.DefaultConfig method)
getint() (mangadap.util.parser.DefaultConfig method)
getlist() (mangadap.util.parser.DefaultConfig method)
growth_lim() (in module mangadap.proc.util)
guess_regular_grid() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
H
HDUList_mask_wavelengths() (in module mangadap.proc.util)
high_pass_filter() (in module mangadap.util.filter)
I
idlutils_dir() (in module mangadap.config.defaults)
idlver (mangadap.survey.mangampl.MaNGAMPL attribute)
init_DAP_logging() (in module mangadap.util.log)
init_record_array() (in module mangadap.util.fileio)
inputs (mangadap.util.lineprofiles.GaussianLineProfile attribute)
instrumental_dispersion() (mangadap.util.resolution.SpectralResolution method)
integral() (mangadap.util.lineprofiles.GaussianLineProfile static method)
IntegratedGaussianLSF (class in mangadap.util.lineprofiles)
interp_value_fromR() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
interpolate_masked_vector() (in module mangadap.util.filter)
interpolator (mangadap.util.resolution.SpectralResolution attribute)
K
kernel (mangadap.util.resolution.VariableGaussianKernel attribute)
keyword_specified() (mangadap.util.parser.DefaultConfig method)
L
line_coeff() (in module mangadap.util.misc)
list_to_csl_string() (in module mangadap.util.parser)
LMC2ExtinctionCoefficients (class in mangadap.util.extinction)
log10 (mangadap.util.resolution.SpectralResolution attribute)
log_output() (in module mangadap.util.log)
M
m (mangadap.util.resolution.VariableGaussianKernel attribute)
(mangadap.util.sampling.Resample attribute)
mangadap (module)
mangadap.config (module)
mangadap.config.defaults (module)
mangadap.contrib (module)
mangadap.contrib.LambdaR_2D_forMaNGA (module)
mangadap.contrib.xjmc (module)
mangadap.par (module)
mangadap.par.util (module)
mangadap.proc (module)
mangadap.proc.util (module)
mangadap.survey (module)
mangadap.survey.mangampl (module)
mangadap.survey.util (module)
mangadap.util (module)
mangadap.util.constants (module)
mangadap.util.exception_tools (module)
mangadap.util.extinction (module)
mangadap.util.fileio (module)
mangadap.util.filter (module)
mangadap.util.geometry (module)
mangadap.util.lineprofiles (module)
mangadap.util.log (module)
mangadap.util.mapping (module)
mangadap.util.misc (module)
mangadap.util.parser (module)
mangadap.util.resolution (module)
mangadap.util.sampling (module)
MaNGAMPL (class in mangadap.survey.mangampl)
map_beam_patch() (in module mangadap.util.mapping)
map_center_pixel_offset() (in module mangadap.util.mapping)
map_extent() (in module mangadap.util.mapping)
map_quantity() (in module mangadap.util.mapping)
mask (mangadap.util.filter.BoxcarFilter attribute)
masked_pixelized_image() (in module mangadap.util.mapping)
match() (mangadap.util.resolution.SpectralResolution method)
match_map_arrays() (in module mangadap.util.mapping)
match_spectral_resolution() (in module mangadap.util.resolution)
matplotlibver (mangadap.survey.mangampl.MaNGAMPL attribute)
mean (mangadap.util.lineprofiles.GaussianLineProfile attribute)
mean_indx() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
min_sig (mangadap.util.resolution.SpectralResolution attribute)
module_logging() (in module mangadap.util.log)
module_version() (in module mangadap.survey.util)
moment() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
moment_err() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
mplver (mangadap.survey.mangampl.MaNGAMPL attribute)
N
NCompLineProfile (class in mangadap.util.lineprofiles)
npar() (mangadap.util.lineprofiles.GaussianLSF static method)
numpyver (mangadap.survey.mangampl.MaNGAMPL attribute)
O
off_diagonal_identity() (in module mangadap.util.filter)
offset_GaussianKernelDifference() (mangadap.util.resolution.SpectralResolution method)
optimal_scale() (in module mangadap.proc.util)
outborders (mangadap.util.sampling.Resample attribute)
oute (mangadap.util.sampling.Resample attribute)
outf (mangadap.util.sampling.Resample attribute)
outputs (mangadap.util.lineprofiles.GaussianLineProfile attribute)
outx (mangadap.util.sampling.Resample attribute)
outy (mangadap.util.sampling.Resample attribute)
P
p (mangadap.util.lineprofiles.FFTGaussianLSF attribute)
(mangadap.util.lineprofiles.GaussianLSF attribute)
(mangadap.util.lineprofiles.IntegratedGaussianLSF attribute)
(mangadap.util.resolution.VariableGaussianKernel attribute)
pa (mangadap.util.geometry.SemiMajorAxisCoo attribute)
param_names (mangadap.util.lineprofiles.GaussianLineProfile attribute)
parameters_from_moments() (mangadap.util.lineprofiles.GaussianLSF method)
parse_dap_file_name() (in module mangadap.util.parser)
parse_drp_file_name() (in module mangadap.util.parser)
pixel (mangadap.util.lineprofiles.FFTGaussianLSF attribute)
point_inside_polygon() (in module mangadap.util.geometry)
polar() (mangadap.util.geometry.SemiMajorAxisCoo method)
polar_invert() (mangadap.util.geometry.SemiMajorAxisCoo method)
polygon_winding_number() (in module mangadap.util.geometry)
ppxf_tied_parameters() (in module mangadap.contrib.xjmc)
print_frame() (in module mangadap.util.exception_tools)
product_version() (in module mangadap.survey.util)
pydlver (mangadap.survey.mangampl.MaNGAMPL attribute)
pythonver (mangadap.survey.mangampl.MaNGAMPL attribute)
R
rad2arcs (mangadap.util.constants.DAPConstants attribute)
,
[1]
read() (mangadap.util.parser.DefaultConfig method)
read_template_spectrum() (in module mangadap.util.fileio)
readfits_1dspec() (in module mangadap.util.fileio)
rec_to_fits_col_dim() (in module mangadap.util.fileio)
rec_to_fits_type() (in module mangadap.util.fileio)
Rectangle_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA)
recursive_dict_evaluate() (in module mangadap.par.util)
reddening_vector_calzetti() (in module mangadap.util.extinction)
reddening_vector_ccm() (in module mangadap.util.extinction)
reddening_vector_fm() (in module mangadap.util.extinction)
replace_with_data_from_nearest_coo() (in module mangadap.proc.util)
Resample (class in mangadap.util.sampling)
resample_vector_npix() (in module mangadap.util.sampling)
rot (mangadap.util.geometry.SemiMajorAxisCoo attribute)
Rotate_Corners() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
rotPA() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
S
sample() (mangadap.util.lineprofiles.FFTGaussianLSF method)
(mangadap.util.lineprofiles.GaussianLSF method)
(mangadap.util.lineprofiles.IntegratedGaussianLSF method)
(mangadap.util.lineprofiles.NCompLineProfile method)
sample_growth() (in module mangadap.proc.util)
scale_flux() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
scale_stddev() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
scipyver (mangadap.survey.mangampl.MaNGAMPL attribute)
sdss_maskbits_file() (in module mangadap.config.defaults)
select() (mangadap.contrib.LambdaR_2D_forMaNGA.Circle_Zone method)
(mangadap.contrib.LambdaR_2D_forMaNGA.Rectangle_Zone method)
select_database() (in module mangadap.proc.util)
select_proc_method() (in module mangadap.proc.util)
select_spaxels() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
Selection_Zone (class in mangadap.contrib.LambdaR_2D_forMaNGA)
SemiMajorAxisCoo (class in mangadap.util.geometry)
set_flux() (mangadap.util.lineprofiles.NCompLineProfile method)
set_mean() (mangadap.util.lineprofiles.NCompLineProfile method)
set_par() (mangadap.util.lineprofiles.GaussianLSF method)
set_stddev() (mangadap.util.lineprofiles.NCompLineProfile method)
shift_mean() (mangadap.util.lineprofiles.GaussianLineProfile static method)
(mangadap.util.lineprofiles.NCompLineProfile method)
short_warning() (in module mangadap)
(in module mangadap.util.log)
show() (mangadap.survey.mangampl.MaNGAMPL method)
sidereal_year (mangadap.util.constants.DAPConstants attribute)
,
[1]
sig2fwhm (mangadap.util.constants.DAPConstants attribute)
,
[1]
sig_mask (mangadap.util.resolution.SpectralResolution attribute)
sig_pd (mangadap.util.resolution.SpectralResolution attribute)
sig_vo (mangadap.util.resolution.SpectralResolution attribute)
sigma (mangadap.util.lineprofiles.GaussianLineProfile attribute)
(mangadap.util.resolution.VariableGaussianKernel attribute)
smooth() (mangadap.util.filter.BoxcarFilter method)
smooth_masked_vector() (in module mangadap.util.filter)
solve() (mangadap.util.geometry.SemiMajorAxisCoo method)
solve_inverse() (mangadap.util.geometry.SemiMajorAxisCoo method)
spectral_coordinate_step() (in module mangadap.util.sampling)
SpectralResolution (class in mangadap.util.resolution)
spectrum_velocity_scale() (in module mangadap.util.sampling)
sres() (mangadap.util.resolution.SpectralResolution method)
strictver (mangadap.survey.mangampl.MaNGAMPL attribute)
SymmetrizeField() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
T
type (mangadap.contrib.LambdaR_2D_forMaNGA.Circle_Zone attribute)
(mangadap.contrib.LambdaR_2D_forMaNGA.Rectangle_Zone attribute)
V
valid_forms() (mangadap.util.extinction.GalacticExtinction static method)
VariableGaussianKernel (class in mangadap.util.resolution)
verify_versions() (mangadap.survey.mangampl.MaNGAMPL method)
W
wave() (mangadap.util.resolution.SpectralResolution method)
wavelength_vector() (in module mangadap.util.fileio)
writefits_1dspec() (in module mangadap.util.fileio)
X
x (mangadap.util.sampling.Resample attribute)
xborders (mangadap.util.sampling.Resample attribute)
XY_toSemiMajor() (in module mangadap.contrib.LambdaR_2D_forMaNGA)
Y
y (mangadap.util.sampling.Resample attribute)
Z
zmom (mangadap.util.lineprofiles.GaussianLineProfile attribute)
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